Evaluation of breeds and crosses of domestic animals

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TABLE 1. Expectations for genetic effects in a diallel crossbreeeding system

Breed of sire (j)

Breed of dam (i)

A

B

C

A







0



B








0


C









0

where:

 and  are breed average individual and maternal effects, and


, is the mean heterosis effect for a two-breed reciprocal cross

, is mean phenotype for one purebred

Xij, is mean phenotype for a two-breed-cross


 breed maternal less

paternal effect, because


 breed mean individual effect

 mean heterosis for reciprocal cross.

 specific reciprocal effect

 breed mean heterosis


Table 2. Second phase of diallel mating design to estimate heterosis  for maternal effects on progeny performance (hM)a.

 

Breed of dams

Breed of sires

A

B

C

D

A

 

B•A

C•A

D•A

B

A•B

 

C•B

D•B

C

A•C

B•C

 

D•C

D

A•D

B•D

C•D

 

AB+BA

 

 

C(AB+BA)

D(AB+BA)

AC+CA

 

B(AC+CA)

 

D(AC+CA)

AD+DA

 

B(AD+DA)

C(AD+DA)

 

BC+CB

A(BC+CB)

 

 

D(BC+CB)

BD+DB

A(BD+DB)

 

C(BD+DB)

 

CD+DC

A(CD+DC)

B(CD+DC)

 

 


aSampling error for estimates of  will be minimum, for any total scale of experiment, when equal numbers of contemporary progeny are produced for each mating combination, i.e. DA, DB, D(A•B) and D(B•A), and when each sire of a breed produces the same proportion of progeny in each cross.


Table 3. Expected fraction of defined genetic components in deviations of alternative
 crossbreeding categories from weighted mean of parental breeds relative to
Ft heterosis, h = d + l/2gg.


 

 

 

 

 

 

generationa

Heterosis

 

 

Recombinationb

 

 

 













1

0

0

0

0

0

0

0

0

0

0


1/2

1

1

1/4

1/2

0

0

0

0

0

0


 A(AB)

 B(AB)

AB×A

AB×B

Composite

1/2

1/2

1/2

1/4

1/2

1/4

1/2

1/4

1/2

0

0

1/2

1

0

 

 

 

 

 

 

 

 

SCALESYM32}

1/8

1/2

0

0

0

0

0

0

1/2

0

1

 

 

 

 

 

 

 

 


 

–––

>







 

 

n=2

1/2

1/2

1/2

1/4

1/2

1/4

1/2

1/4

1/2

0

0

n=3

2/3

2/3

2/3

1/3

2/3

1/3

2/3

1/3

2/3

0

0

n=4

3/4

3/4

3/4

3/8

3/4

3/8

3/4

3/8

3/4

0

0

Rotation


–––>

0





0

0

 

 

n=2

2/3

–––>

0

1/9

4/9

1/9

4/9

0

0

0

0

n=3

6/7

–––>

0

1/7

4/7

1/7

4/7

0

0

0

0

n=4

14/15

–––>

0

7/45

28/45

7/45

28/45

0

0

0

0

C♂ Rotation♀

 

 

 

 

 

 

 

 

 

 

 

n=2

1

2/3

0

1/9

4/9

1/9

4/9

0

0

0

0

n=3

1

6/7

0

1/7

4/7

1/7

4/7

0

0

0

0

n=4

1

14/15

0

1/45

28/45

7/45

28/45

0

0

0

0

3-breed Cross

 

 

 

 

 

 

 

 

 

 

 

C × A B

1

1

0

1/8

1/4

0

0

0



a b × C

1

0

1

1/8

1/4

0

0

0



4 Breed Cross

CD× AB♀

 

 

 

 

 

 

 

 

 

 

 

1

1

1

1/4

1/2

0

0

0



aMean of reciprocal crosses, equilibrium for n sire breed rotation, or for qi, fractions of n breeds in a composite at F3 or later generation.

bFrom Dickerson (1973) and Hill (1982).


Table 4. Expected fraction of defined genetic components in linear contrasts between means for alternative matinga

Code

Linear Contrast







1

BA–AA

(B–A)/2

BA

0

0

0

0

2

BA–CA

(B–C)/2

BA–CA

0

0

0

0

3

A(BA)–AA

(B–A)/4

BA/2

BA/8

(B–A)/2

BA

0

4

(BA)2–AA

(B–A)/2

BA/2

BA/4

(B–A)/2

BA

0

5

B(BA)–AA

3(B–A)/4

BA/2

BA/8

(B–A)/2

BA

0

5–3

 

(B–A)/2

0

0

0

0

0

4–(3+5)/2

 

0

0

BA/8

0

0

0

6

A(BA)–A(CA)

(B–C)/4

(BA–CA)/2

(BA–CA)/8

(B–C)/2

BA–CA

0

7

(BA)2–(CA)2

(B–C)/2

(BA–CA)/2

(BA–CA)/4

(B–C)/2

BA–CA

0

8

B(BA)–C(CA)

3(B–C)/4

(BA–CA)/2

(BA–CA)/8

(B–C)/2

BA–CA

0

8–6

 

(B–C)/2

0

0

0

0

0

7–(8+6)/2

 

0

0

(BA–CA)/8

0

0

0

9

D(BA)–AA


(DB+DA)/2

BA/8

(B–A)/2

BA

0

10

D(A·BA)–AA



3BA/32

(B–A)/4

BA/2

BA/8

11

D(BA)2–AA


(DB+DA)/2

4BA/32

(B–A)/2

BA/2

BA/4

12

D(B·BA)–AA



3BA/32

3(B–A)/4

BA/2

BA/8

12–10

 

(B–A)/4

(DB–DA)/2

0

(B–A)/2

0

0

9–11

 

0

0

0

0

BA/2

–BA/4

13

D(BA–D(CA)

(B–C)/4

(DB–DC)/2

(BA–CA)/8

(B–C)/2

BA–CA

0

14

D(A·BA)–D(A·CA)

(B–C)/8

(DB–DC)/4

3(BA–CA)/32

(B–C)/4

(BA–CA)/2

(BA–CA)/8

15

D(BA)2  –D(CA)2

(B–C)/4

(DB–DC)/2

(BA–CA)/8

(B–C)/2

(BA–CA)/2

(BA–CA)/4

16

D(B·BA)–D(C·CA)

3(B–C)/8

3(DB–DC)/4

3(BA–CA)/32

(B–C)/4

(BA–CA)/2

(BA–CA)/8

13–15

 

0

0

0

0

(BA–CA)/2

–(BA–CA)/4

15–(14+16)/2


 

 

 

 

 

 

11–(10+12)/2

0

0

(BA–CA)/32

0

0

(BA–CA)/8

a"Individual (I) and maternal (M) additive (gI and gM), heterosis hI and hM and non-allelic gene interaction (rI and rM) effects on performance traits.


Table 5. Level of significance (P) for a 5% mean difference (+ or -) between two strains in traits with differing Coefficient Variation (CV) and heritability (h2).

 

 

No progeny per

No. sires /strain Ns

SEa


t =

Minimum t forc

strain

sire

P05

P01

a. CV = 20%; h2 = 10%

 

 

 

 

280

28

 

10

1.95

2.57

2.10

2.88

 

20

 

14

1.87

2.67

2.06

2.78

 

14

 

20

1.81

2.76

2.02

2.71

 

10

 

28

1.77

2.82

2.01

2.67

 

5

 

56

1.72

2.90

1.98

2.62

220

20

 

11

2.11

2.37

2.09

2.85

 

10

 

22

2.00

2.50

2.02

2.71

 

5

 

44

1.94

2.57

1.99

2.63

b. CV = 10%; h2 = 10%

 

 

 

 

140

20

 

7

1.45

3.44

2.18

3.06

 

10

 

14

1.32

3.78

2.06

2.78

 

5

 

28

1.25

3.99

2.01

2.67

100

20

 

5

1.72

2.91

2.31

3.36

 

10

 

10

1.56

3.20

2.10

2.88

 

5

 

20

1.48

3.37

2.02

2.71

80

20

 

4

1.92

2.60

2.45

3.71

 

10

 

8

1.75

2.85

2.14

2.98

 

5

 

16

1.66

3.02

2.04

2.75

60

20

 

3

2.22

2.25

2.78

4.60

 

10

 

6

2.02

2.47

2.23

3.17

 

5

 

12

1.92

2.60

2.07

2.82

40

20

 

2

2.72

1.84

4.30

9.92

 

10

 

4

2.48

2.02

2.45

3.71

 

5

 

8

2.34

2.13

2.14

2.98

 

  with  Total phenotypic variance are expressed as the squared coefficient of variation (%), assuming one (1) progeny per dam.


cSee Table A.3 in Steele and Torrie (1960) or any other source of probability values for t-ratio, plus or minus mean difference (i.e. 2-tailed distributions).


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